STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000703125_00386Unannotated protein. (142 aa)    
Predicted Functional Partners:
GCA_000703125_00384
Unannotated protein.
 
  
 0.872
GCA_000703125_00385
Unannotated protein.
 
     0.868
GCA_000703125_00383
Unannotated protein.
 
     0.864
GCA_000703125_00381
Unannotated protein.
 
     0.835
cinA
Unannotated protein; Belongs to the CinA family.
    
 0.796
nadE
Unannotated protein; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source.
    
 0.723
GCA_000703125_00382
Unannotated protein.
 
     0.570
BD821_101127
Unannotated protein.
    
  0.556
GCA_000703125_00380
Unannotated protein.
 
     0.505
GCA_000703125_00379
Unannotated protein.
 
   
 0.474
Your Current Organism:
Clostridium algidicarnis
NCBI taxonomy Id: 37659
Other names: C. algidicarnis, DSM 15099, NCFB 2931, NCIMB 702931
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.