Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
BD821_101186 | BD821_10936 | GCA_000703125_02771 | GCA_000703125_02248 | Unannotated protein. | Unannotated protein. | 0.796 |
BD821_101186 | apt | GCA_000703125_02771 | GCA_000703125_02707 | Unannotated protein. | Unannotated protein; Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis. | 0.794 |
BD821_101186 | guaA | GCA_000703125_02771 | GCA_000703125_00387 | Unannotated protein. | Unannotated protein; Catalyzes the synthesis of GMP from XMP. | 0.993 |
BD821_101186 | guaB | GCA_000703125_02771 | GCA_000703125_00388 | Unannotated protein. | Unannotated protein; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family. | 0.987 |
BD821_101186 | purA | GCA_000703125_02771 | GCA_000703125_00969 | Unannotated protein. | Unannotated protein; Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP; Belongs to the adenylosuccinate synthetase family. | 0.898 |
BD821_101186 | rph | GCA_000703125_02771 | GCA_000703125_00346 | Unannotated protein. | Unannotated protein; Phosphorolytic 3'-5' exoribonuclease that plays an important role in tRNA 3'-end maturation. Removes nucleotide residues following the 3'-CCA terminus of tRNAs; can also add nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates, but this may not be physiologically important. Probably plays a role in initiation of 16S rRNA degradation (leading to ribosome degradation) during starvation. | 0.948 |
BD821_101186 | xpt | GCA_000703125_02771 | GCA_000703125_01926 | Unannotated protein. | Unannotated protein; Converts the preformed base xanthine, a product of nucleic acid breakdown, to xanthosine 5'-monophosphate (XMP), so it can be reused for RNA or DNA synthesis. | 0.794 |
BD821_10936 | BD821_101186 | GCA_000703125_02248 | GCA_000703125_02771 | Unannotated protein. | Unannotated protein. | 0.796 |
BD821_10936 | apt | GCA_000703125_02248 | GCA_000703125_02707 | Unannotated protein. | Unannotated protein; Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis. | 0.840 |
BD821_10936 | argS | GCA_000703125_02248 | GCA_000703125_02186 | Unannotated protein. | Unannotated protein. | 0.827 |
BD821_10936 | guaA | GCA_000703125_02248 | GCA_000703125_00387 | Unannotated protein. | Unannotated protein; Catalyzes the synthesis of GMP from XMP. | 0.994 |
BD821_10936 | guaB | GCA_000703125_02248 | GCA_000703125_00388 | Unannotated protein. | Unannotated protein; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family. | 0.973 |
BD821_10936 | purA | GCA_000703125_02248 | GCA_000703125_00969 | Unannotated protein. | Unannotated protein; Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP; Belongs to the adenylosuccinate synthetase family. | 0.991 |
BD821_10936 | pyrD | GCA_000703125_02248 | GCA_000703125_02637 | Unannotated protein. | Unannotated protein; Catalyzes the conversion of dihydroorotate to orotate. | 0.875 |
BD821_10936 | rph | GCA_000703125_02248 | GCA_000703125_00346 | Unannotated protein. | Unannotated protein; Phosphorolytic 3'-5' exoribonuclease that plays an important role in tRNA 3'-end maturation. Removes nucleotide residues following the 3'-CCA terminus of tRNAs; can also add nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates, but this may not be physiologically important. Probably plays a role in initiation of 16S rRNA degradation (leading to ribosome degradation) during starvation. | 0.569 |
BD821_10936 | xpt | GCA_000703125_02248 | GCA_000703125_01926 | Unannotated protein. | Unannotated protein; Converts the preformed base xanthine, a product of nucleic acid breakdown, to xanthosine 5'-monophosphate (XMP), so it can be reused for RNA or DNA synthesis. | 0.840 |
apt | BD821_101186 | GCA_000703125_02707 | GCA_000703125_02771 | Unannotated protein; Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis. | Unannotated protein. | 0.794 |
apt | BD821_10936 | GCA_000703125_02707 | GCA_000703125_02248 | Unannotated protein; Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis. | Unannotated protein. | 0.840 |
apt | guaA | GCA_000703125_02707 | GCA_000703125_00387 | Unannotated protein; Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis. | Unannotated protein; Catalyzes the synthesis of GMP from XMP. | 0.988 |
apt | guaB | GCA_000703125_02707 | GCA_000703125_00388 | Unannotated protein; Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis. | Unannotated protein; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family. | 0.931 |
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