STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BD821_11714Unannotated protein. (296 aa)    
Predicted Functional Partners:
BD821_11713
Unannotated protein.
 0.999
pyrD
Unannotated protein; Catalyzes the conversion of dihydroorotate to orotate.
 
 0.991
BD821_10916
Unannotated protein.
 0.977
GCA_000703125_00109
Unannotated protein.
 0.975
BD821_101127
Unannotated protein.
  
 
 0.973
BD821_102133
Unannotated protein; Belongs to the sulfur carrier protein TusA family.
  
 0.943
pyrE
Unannotated protein; Catalyzes the transfer of a ribosyl phosphate group from 5- phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP).
  
 
 0.877
pyrF
Unannotated protein; Belongs to the OMP decarboxylase family. Type 2 subfamily.
  
 
 0.866
pyrB
Unannotated protein; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. ATCase family.
  
 
 0.856
BD821_11455
Unannotated protein.
  
 
 0.808
Your Current Organism:
Clostridium algidicarnis
NCBI taxonomy Id: 37659
Other names: C. algidicarnis, DSM 15099, NCFB 2931, NCIMB 702931
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.