STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000703125_00604Unannotated protein. (560 aa)    
Predicted Functional Partners:
GCA_000703125_00606
Unannotated protein.
 
 
 0.995
GCA_000703125_00607
Unannotated protein.
 
 
 
 0.995
GCA_000703125_00603
Unannotated protein.
 
   
 0.925
GCA_000703125_00605
Unannotated protein.
       0.773
BD821_108106
Unannotated protein.
    
   0.769
GCA_000703125_00558
Unannotated protein.
    
   0.769
GCA_000703125_01118
Unannotated protein.
    
   0.769
BD821_102200
Unannotated protein.
    
   0.769
GCA_000703125_00602
Unannotated protein.
     
 0.570
glmS
Unannotated protein; Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source.
     
 0.501
Your Current Organism:
Clostridium algidicarnis
NCBI taxonomy Id: 37659
Other names: C. algidicarnis, DSM 15099, NCFB 2931, NCIMB 702931
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.