STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000703125_01150Unannotated protein. (327 aa)    
Predicted Functional Partners:
GCA_000703125_01447
Unannotated protein.
  
 
 0.971
BD821_11129
Unannotated protein.
  
 0.868
BD821_11236
Unannotated protein.
  
   0.867
BD821_1033
Unannotated protein.
    
 0.853
GCA_000703125_01414
Unannotated protein.
  
 
  0.778
BD821_10526
Unannotated protein.
  
   0.774
BD821_12616
Unannotated protein.
 
  
0.761
BD821_10234
Unannotated protein.
    
  0.754
BD821_106113
Unannotated protein.
 
  
 0.747
GCA_000703125_01149
Unannotated protein.
       0.747
Your Current Organism:
Clostridium algidicarnis
NCBI taxonomy Id: 37659
Other names: C. algidicarnis, DSM 15099, NCFB 2931, NCIMB 702931
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.