STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BD821_1144Unannotated protein. (523 aa)    
Predicted Functional Partners:
BD821_102133
Unannotated protein; Belongs to the sulfur carrier protein TusA family.
  
    0.767
BD821_10470
Unannotated protein; Belongs to the dicarboxylate/amino acid:cation symporter (DAACS) (TC 2.A.23) family.
  
     0.625
BD821_1143
Unannotated protein.
 
     0.582
BD821_1265
Unannotated protein.
   
    0.504
BD821_12725
Unannotated protein; Belongs to the peptidase M20A family.
 
  
 0.467
BD821_11189
Unannotated protein.
 
  
 0.433
GCA_000703125_00592
Unannotated protein.
 
  
 0.430
rpmE
Unannotated protein; Binds the 23S rRNA.
  
    0.424
Your Current Organism:
Clostridium algidicarnis
NCBI taxonomy Id: 37659
Other names: C. algidicarnis, DSM 15099, NCFB 2931, NCIMB 702931
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.