STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BD821_10526Unannotated protein. (203 aa)    
Predicted Functional Partners:
BD821_12616
Unannotated protein.
 
   0.803
GCA_000703125_01102
Unannotated protein.
  
 
   0.798
BD821_11467
Unannotated protein.
   
 
 0.789
GCA_000703125_01150
Unannotated protein.
  
   0.774
BD821_10336
Unannotated protein.
  
     0.770
BD821_10689
Unannotated protein.
    
   0.769
BD821_10484
Unannotated protein.
  
     0.764
BD821_103196
Unannotated protein.
  
     0.754
GCA_000703125_00089
Unannotated protein.
   
 
 0.753
GCA_000703125_00481
Unannotated protein.
   
 
 0.753
Your Current Organism:
Clostridium algidicarnis
NCBI taxonomy Id: 37659
Other names: C. algidicarnis, DSM 15099, NCFB 2931, NCIMB 702931
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.