STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BD821_102103Unannotated protein. (482 aa)    
Predicted Functional Partners:
BD821_11265
Unannotated protein.
 
  0.958
BD821_11264
Unannotated protein.
 
    0.879
BD821_1258
Unannotated protein.
 
    0.798
BD821_10185
Unannotated protein.
    
 0.795
BD821_102155
Unannotated protein.
   
 
  0.786
gpsA
Unannotated protein; Belongs to the NAD-dependent glycerol-3-phosphate dehydrogenase family.
  
 
 0.780
BD821_11027
Unannotated protein.
    
  0.772
BD821_11028
Unannotated protein.
    
  0.769
BD821_11029
Unannotated protein.
    
  0.769
BD821_11273
Unannotated protein.
   
 
  0.675
Your Current Organism:
Clostridium algidicarnis
NCBI taxonomy Id: 37659
Other names: C. algidicarnis, DSM 15099, NCFB 2931, NCIMB 702931
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.