STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BD821_102189Unannotated protein; Belongs to the binding-protein-dependent transport system permease family. (311 aa)    
Predicted Functional Partners:
BD821_102187
Unannotated protein.
 
 0.999
BD821_102188
Unannotated protein; Belongs to the binding-protein-dependent transport system permease family.
 
 
0.997
BD821_102186
Unannotated protein.
 
 
 0.995
BD821_102190
Unannotated protein.
       0.649
cinA
Unannotated protein; Belongs to the CinA family.
       0.495
BD821_102191
Unannotated protein.
       0.423
Your Current Organism:
Clostridium algidicarnis
NCBI taxonomy Id: 37659
Other names: C. algidicarnis, DSM 15099, NCFB 2931, NCIMB 702931
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.