STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BD821_11312Unannotated protein. (267 aa)    
Predicted Functional Partners:
BD821_11313
Unannotated protein.
 
 
 0.996
BD821_11311
Unannotated protein.
 
 
 0.989
BD821_12040
Unannotated protein.
 
 
 0.973
BD821_12038
Unannotated protein.
 
 
 0.964
GCA_000703125_00380
Unannotated protein.
  
 
 0.725
BD821_106122
Unannotated protein.
    
 0.515
BD821_12015
Unannotated protein.
    
 0.499
gpr
Unannotated protein; Initiates the rapid degradation of small, acid-soluble proteins during spore germination; Belongs to the peptidase A25 family.
  
    0.497
BD821_103207
Unannotated protein.
 
  
 0.458
BD821_11314
Unannotated protein.
       0.452
Your Current Organism:
Clostridium algidicarnis
NCBI taxonomy Id: 37659
Other names: C. algidicarnis, DSM 15099, NCFB 2931, NCIMB 702931
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.