Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
BD821_103197 | prmC | GCA_000703125_02121 | GCA_000703125_01990 | Unannotated protein; Belongs to the arginase family. | Unannotated protein; Methylates the class 1 translation termination release factors RF1/PrfA and RF2/PrfB on the glutamine residue of the universally conserved GGQ motif; Belongs to the protein N5-glutamine methyltransferase family. PrmC subfamily. | 0.843 |
BD821_10359 | BD821_10362 | GCA_000703125_01989 | GCA_000703125_01992 | Unannotated protein. | Unannotated protein. | 0.610 |
BD821_10359 | BD821_10364 | GCA_000703125_01989 | GCA_000703125_01994 | Unannotated protein. | Unannotated protein; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. | 0.556 |
BD821_10359 | glyA | GCA_000703125_01989 | GCA_000703125_02697 | Unannotated protein. | Unannotated protein; Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF-independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism. | 0.411 |
BD821_10359 | prfA | GCA_000703125_01989 | GCA_000703125_01991 | Unannotated protein. | Unannotated protein; Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA. | 0.929 |
BD821_10359 | prmC | GCA_000703125_01989 | GCA_000703125_01990 | Unannotated protein. | Unannotated protein; Methylates the class 1 translation termination release factors RF1/PrfA and RF2/PrfB on the glutamine residue of the universally conserved GGQ motif; Belongs to the protein N5-glutamine methyltransferase family. PrmC subfamily. | 0.821 |
BD821_10359 | rpmE | GCA_000703125_01989 | GCA_000703125_01988 | Unannotated protein. | Unannotated protein; Binds the 23S rRNA. | 0.697 |
BD821_10362 | BD821_10359 | GCA_000703125_01992 | GCA_000703125_01989 | Unannotated protein. | Unannotated protein. | 0.610 |
BD821_10362 | BD821_10364 | GCA_000703125_01992 | GCA_000703125_01994 | Unannotated protein. | Unannotated protein; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. | 0.664 |
BD821_10362 | prfA | GCA_000703125_01992 | GCA_000703125_01991 | Unannotated protein. | Unannotated protein; Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA. | 0.792 |
BD821_10362 | prmC | GCA_000703125_01992 | GCA_000703125_01990 | Unannotated protein. | Unannotated protein; Methylates the class 1 translation termination release factors RF1/PrfA and RF2/PrfB on the glutamine residue of the universally conserved GGQ motif; Belongs to the protein N5-glutamine methyltransferase family. PrmC subfamily. | 0.738 |
BD821_10362 | rpmE | GCA_000703125_01992 | GCA_000703125_01988 | Unannotated protein. | Unannotated protein; Binds the 23S rRNA. | 0.558 |
BD821_10364 | BD821_10359 | GCA_000703125_01994 | GCA_000703125_01989 | Unannotated protein; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. | Unannotated protein. | 0.556 |
BD821_10364 | BD821_10362 | GCA_000703125_01994 | GCA_000703125_01992 | Unannotated protein; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. | Unannotated protein. | 0.664 |
BD821_10364 | glyA | GCA_000703125_01994 | GCA_000703125_02697 | Unannotated protein; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. | Unannotated protein; Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF-independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism. | 0.809 |
BD821_10364 | prfA | GCA_000703125_01994 | GCA_000703125_01991 | Unannotated protein; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. | Unannotated protein; Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA. | 0.653 |
BD821_10364 | prmC | GCA_000703125_01994 | GCA_000703125_01990 | Unannotated protein; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. | Unannotated protein; Methylates the class 1 translation termination release factors RF1/PrfA and RF2/PrfB on the glutamine residue of the universally conserved GGQ motif; Belongs to the protein N5-glutamine methyltransferase family. PrmC subfamily. | 0.848 |
BD821_10364 | rpmE | GCA_000703125_01994 | GCA_000703125_01988 | Unannotated protein; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. | Unannotated protein; Binds the 23S rRNA. | 0.551 |
BD821_10736 | BD821_11180 | GCA_000703125_02396 | GCA_000703125_00220 | Unannotated protein. | Unannotated protein; Belongs to the V-ATPase proteolipid subunit family. | 0.848 |
BD821_10736 | prmC | GCA_000703125_02396 | GCA_000703125_01990 | Unannotated protein. | Unannotated protein; Methylates the class 1 translation termination release factors RF1/PrfA and RF2/PrfB on the glutamine residue of the universally conserved GGQ motif; Belongs to the protein N5-glutamine methyltransferase family. PrmC subfamily. | 0.773 |
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