Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
BD821_103156 | BD821_103157 | GCA_000703125_02085 | GCA_000703125_02086 | Unannotated protein. | Unannotated protein. | 0.995 |
BD821_103156 | BD821_103158 | GCA_000703125_02085 | GCA_000703125_02087 | Unannotated protein. | Unannotated protein. | 0.494 |
BD821_103156 | BD821_11312 | GCA_000703125_02085 | GCA_000703125_01923 | Unannotated protein. | Unannotated protein. | 0.446 |
BD821_103156 | BD821_11313 | GCA_000703125_02085 | GCA_000703125_01922 | Unannotated protein. | Unannotated protein. | 0.446 |
BD821_103157 | BD821_103156 | GCA_000703125_02086 | GCA_000703125_02085 | Unannotated protein. | Unannotated protein. | 0.995 |
BD821_103157 | BD821_103158 | GCA_000703125_02086 | GCA_000703125_02087 | Unannotated protein. | Unannotated protein. | 0.494 |
BD821_103157 | BD821_11311 | GCA_000703125_02086 | GCA_000703125_01924 | Unannotated protein. | Unannotated protein. | 0.405 |
BD821_103157 | BD821_11312 | GCA_000703125_02086 | GCA_000703125_01923 | Unannotated protein. | Unannotated protein. | 0.446 |
BD821_103157 | BD821_11313 | GCA_000703125_02086 | GCA_000703125_01922 | Unannotated protein. | Unannotated protein. | 0.446 |
BD821_103157 | codY | GCA_000703125_02086 | GCA_000703125_02574 | Unannotated protein. | Unannotated protein; DNA-binding protein that represses the expression of many genes that are induced as cells make the transition from rapid exponential growth to stationary phase. It is a GTP-binding protein that senses the intracellular GTP concentration as an indicator of nutritional limitations. At low GTP concentration it no longer binds GTP and stop to act as a transcriptional repressor; Belongs to the CodY family. | 0.438 |
BD821_103157 | rho | GCA_000703125_02086 | GCA_000703125_01987 | Unannotated protein. | Unannotated protein; Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA- dependent ATPase activity, and release of the mRNA from the DNA template. | 0.452 |
BD821_103157 | spoVG | GCA_000703125_02086 | GCA_000703125_00809 | Unannotated protein. | Unannotated protein; Could be involved in septation. | 0.562 |
BD821_103158 | BD821_103156 | GCA_000703125_02087 | GCA_000703125_02085 | Unannotated protein. | Unannotated protein. | 0.494 |
BD821_103158 | BD821_103157 | GCA_000703125_02087 | GCA_000703125_02086 | Unannotated protein. | Unannotated protein. | 0.494 |
BD821_11311 | BD821_103157 | GCA_000703125_01924 | GCA_000703125_02086 | Unannotated protein. | Unannotated protein. | 0.405 |
BD821_11311 | BD821_11312 | GCA_000703125_01924 | GCA_000703125_01923 | Unannotated protein. | Unannotated protein. | 0.989 |
BD821_11311 | BD821_11313 | GCA_000703125_01924 | GCA_000703125_01922 | Unannotated protein. | Unannotated protein. | 0.989 |
BD821_11312 | BD821_103156 | GCA_000703125_01923 | GCA_000703125_02085 | Unannotated protein. | Unannotated protein. | 0.446 |
BD821_11312 | BD821_103157 | GCA_000703125_01923 | GCA_000703125_02086 | Unannotated protein. | Unannotated protein. | 0.446 |
BD821_11312 | BD821_11311 | GCA_000703125_01923 | GCA_000703125_01924 | Unannotated protein. | Unannotated protein. | 0.989 |
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