STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BD821_1188Unannotated protein. (334 aa)    
Predicted Functional Partners:
BD821_106109
Unannotated protein.
 
     0.615
BD821_11231
Unannotated protein.
  
     0.611
BD821_103196
Unannotated protein.
 
     0.543
BD821_10389
Unannotated protein.
  
     0.530
ybeY
Unannotated protein; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA.
   
    0.497
BD821_1083
Unannotated protein.
  
    0.495
GCA_000703125_02202
Unannotated protein.
       0.473
GCA_000703125_02203
Unannotated protein.
       0.473
GCA_000703125_02204
Unannotated protein.
       0.473
GCA_000703125_02205
Unannotated protein.
       0.473
Your Current Organism:
Clostridium algidicarnis
NCBI taxonomy Id: 37659
Other names: C. algidicarnis, DSM 15099, NCFB 2931, NCIMB 702931
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.