Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
OAG72486.1 | OAG74165.1 | A0J51_02380 | A0J51_00519 | Alcohol dehydrogenase. | Alcohol dehydrogenase. | 0.407 |
OAG72486.1 | OAG74842.1 | A0J51_02380 | A0J51_00382 | Alcohol dehydrogenase. | Ferredoxin; Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions. | 0.471 |
OAG74164.1 | OAG74165.1 | A0J51_00518 | A0J51_00519 | Transporter. | Alcohol dehydrogenase. | 0.508 |
OAG74165.1 | OAG72486.1 | A0J51_00519 | A0J51_02380 | Alcohol dehydrogenase. | Alcohol dehydrogenase. | 0.407 |
OAG74165.1 | OAG74164.1 | A0J51_00519 | A0J51_00518 | Alcohol dehydrogenase. | Transporter. | 0.508 |
OAG74165.1 | OAG74166.1 | A0J51_00519 | A0J51_00520 | Alcohol dehydrogenase. | Inorganic pyrophosphatase. | 0.474 |
OAG74165.1 | OAG74842.1 | A0J51_00519 | A0J51_00382 | Alcohol dehydrogenase. | Ferredoxin; Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions. | 0.407 |
OAG74165.1 | speH | A0J51_00519 | A0J51_02260 | Alcohol dehydrogenase. | S-adenosylmethionine decarboxylase; Catalyzes the decarboxylation of S-adenosylmethionine to S- adenosylmethioninamine (dcAdoMet), the propylamine donor required for the synthesis of the polyamines spermine and spermidine from the diamine putrescine; Belongs to the prokaryotic AdoMetDC family. Type 1 subfamily. | 0.407 |
OAG74166.1 | OAG74165.1 | A0J51_00520 | A0J51_00519 | Inorganic pyrophosphatase. | Alcohol dehydrogenase. | 0.474 |
OAG74842.1 | OAG72486.1 | A0J51_00382 | A0J51_02380 | Ferredoxin; Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions. | Alcohol dehydrogenase. | 0.471 |
OAG74842.1 | OAG74165.1 | A0J51_00382 | A0J51_00519 | Ferredoxin; Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions. | Alcohol dehydrogenase. | 0.407 |
speH | OAG74165.1 | A0J51_02260 | A0J51_00519 | S-adenosylmethionine decarboxylase; Catalyzes the decarboxylation of S-adenosylmethionine to S- adenosylmethioninamine (dcAdoMet), the propylamine donor required for the synthesis of the polyamines spermine and spermidine from the diamine putrescine; Belongs to the prokaryotic AdoMetDC family. Type 1 subfamily. | Alcohol dehydrogenase. | 0.407 |