Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
OAG71824.1 | OAG71829.1 | A0J51_03065 | A0J51_03070 | D-alanyl-alanine synthetase. | UDP-N-acetylmuramoylalanine--D-glutamate ligase; Belongs to the MurCDEF family. | 0.995 |
OAG71824.1 | OAG72041.1 | A0J51_03065 | A0J51_02633 | D-alanyl-alanine synthetase. | Branched-chain amino acid aminotransferase. | 0.527 |
OAG71824.1 | OAG73358.1 | A0J51_03065 | A0J51_01975 | D-alanyl-alanine synthetase. | tRNA threonylcarbamoyladenosine biosynthesis protein TsaE. | 0.523 |
OAG71824.1 | OAG73843.1 | A0J51_03065 | A0J51_01316 | D-alanyl-alanine synthetase. | Polyketide synthase. | 0.913 |
OAG71824.1 | OAG74060.1 | A0J51_03065 | A0J51_00940 | D-alanyl-alanine synthetase. | Alanine racemase; Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids; Belongs to the alanine racemase family. | 0.945 |
OAG71824.1 | mraY | A0J51_03065 | A0J51_03071 | D-alanyl-alanine synthetase. | phospho-N-acetylmuramoyl-pentapeptide transferase; First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan; Belongs to the glycosyltransferase 4 family. MraY subfamily. | 0.959 |
OAG71824.1 | murC | A0J51_03065 | A0J51_03067 | D-alanyl-alanine synthetase. | UDP-N-acetylmuramate--alanine ligase; Cell wall formation; Belongs to the MurCDEF family. | 0.999 |
OAG71824.1 | murE | A0J51_03065 | A0J51_03073 | D-alanyl-alanine synthetase. | UDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligase; Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan. Belongs to the MurCDEF family. MurE subfamily. | 0.971 |
OAG71824.1 | murF | A0J51_03065 | A0J51_03072 | D-alanyl-alanine synthetase. | UDP-N-acetylmuramyl-tripeptide synthetase; Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein; Belongs to the MurCDEF family. MurF subfamily. | 0.994 |
OAG71829.1 | OAG71824.1 | A0J51_03070 | A0J51_03065 | UDP-N-acetylmuramoylalanine--D-glutamate ligase; Belongs to the MurCDEF family. | D-alanyl-alanine synthetase. | 0.995 |
OAG71829.1 | OAG73843.1 | A0J51_03070 | A0J51_01316 | UDP-N-acetylmuramoylalanine--D-glutamate ligase; Belongs to the MurCDEF family. | Polyketide synthase. | 0.876 |
OAG71829.1 | OAG74060.1 | A0J51_03070 | A0J51_00940 | UDP-N-acetylmuramoylalanine--D-glutamate ligase; Belongs to the MurCDEF family. | Alanine racemase; Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids; Belongs to the alanine racemase family. | 0.763 |
OAG71829.1 | mraY | A0J51_03070 | A0J51_03071 | UDP-N-acetylmuramoylalanine--D-glutamate ligase; Belongs to the MurCDEF family. | phospho-N-acetylmuramoyl-pentapeptide transferase; First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan; Belongs to the glycosyltransferase 4 family. MraY subfamily. | 0.991 |
OAG71829.1 | murC | A0J51_03070 | A0J51_03067 | UDP-N-acetylmuramoylalanine--D-glutamate ligase; Belongs to the MurCDEF family. | UDP-N-acetylmuramate--alanine ligase; Cell wall formation; Belongs to the MurCDEF family. | 0.998 |
OAG71829.1 | murE | A0J51_03070 | A0J51_03073 | UDP-N-acetylmuramoylalanine--D-glutamate ligase; Belongs to the MurCDEF family. | UDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligase; Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan. Belongs to the MurCDEF family. MurE subfamily. | 0.991 |
OAG71829.1 | murF | A0J51_03070 | A0J51_03072 | UDP-N-acetylmuramoylalanine--D-glutamate ligase; Belongs to the MurCDEF family. | UDP-N-acetylmuramyl-tripeptide synthetase; Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein; Belongs to the MurCDEF family. MurF subfamily. | 0.988 |
OAG72041.1 | OAG71824.1 | A0J51_02633 | A0J51_03065 | Branched-chain amino acid aminotransferase. | D-alanyl-alanine synthetase. | 0.527 |
OAG72041.1 | OAG73843.1 | A0J51_02633 | A0J51_01316 | Branched-chain amino acid aminotransferase. | Polyketide synthase. | 0.886 |
OAG72041.1 | OAG74060.1 | A0J51_02633 | A0J51_00940 | Branched-chain amino acid aminotransferase. | Alanine racemase; Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids; Belongs to the alanine racemase family. | 0.721 |
OAG73358.1 | OAG71824.1 | A0J51_01975 | A0J51_03065 | tRNA threonylcarbamoyladenosine biosynthesis protein TsaE. | D-alanyl-alanine synthetase. | 0.523 |
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