STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OAG73535.1Aspartoacylase. (349 aa)    
Predicted Functional Partners:
OAG73534.1
Acetylornithine deacetylase.
 
     0.803
OAG72428.1
Oxidoreductase.
  
     0.675
OAG72450.1
Oxidoreductase.
  
     0.651
OAG73067.1
Hypothetical protein.
  
     0.582
OAG74020.1
Hypothetical protein.
  
     0.553
OAG73532.1
LPS biosynthesis protein.
       0.523
OAG73533.1
Mannosyltransferase.
       0.523
OAG72875.1
Hypothetical protein.
  
     0.503
OAG74864.1
Hypothetical protein.
  
     0.496
OAG72259.1
LPS biosynthesis protein.
  
     0.480
Your Current Organism:
Gluconobacter japonicus
NCBI taxonomy Id: 376620
Other names: BCC 14458, BCC 36733 [[Gluconobacter nephelii]], G. japonicus, Gluconobacter japonicus Malimas et al. 2009 emend. Li et al. 2017, Gluconobacter nephelii, Gluconobacter nephelii Kommanee et al. 2011, LMG 26773 [[Gluconobacter nephelii]], LMG:26773 [[Gluconobacter nephelii]], NBRC 106061 [[Gluconobacter nephelii]], NBRC 3271, PCU 318 [[Gluconobacter nephelii]], PCU:318 [[Gluconobacter nephelii]], strain 7, K. Kondo, strain RBY-1 [[Gluconobacter nephelii]]
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.