STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OAG72910.1Hypothetical protein. (185 aa)    
Predicted Functional Partners:
OAG72908.1
Hypothetical protein.
  
    0.790
OAG72909.1
Hypothetical protein.
       0.773
OAG72911.1
Hypothetical protein.
       0.773
OAG72912.1
Hypothetical protein.
       0.773
OAG74677.1
Heme transporter CcmD.
  
     0.614
OAG72907.1
Hypothetical protein.
       0.548
OAG73817.1
TonB-dependent receptor.
  
     0.509
OAG73828.1
Hypothetical protein.
  
    0.502
OAG72913.1
Hypothetical protein.
       0.501
OAG74115.1
Clostridial hydrophobic W.
  
     0.489
Your Current Organism:
Gluconobacter japonicus
NCBI taxonomy Id: 376620
Other names: BCC 14458, BCC 36733 [[Gluconobacter nephelii]], G. japonicus, Gluconobacter japonicus Malimas et al. 2009 emend. Li et al. 2017, Gluconobacter nephelii, Gluconobacter nephelii Kommanee et al. 2011, LMG 26773 [[Gluconobacter nephelii]], LMG:26773 [[Gluconobacter nephelii]], NBRC 106061 [[Gluconobacter nephelii]], NBRC 3271, PCU 318 [[Gluconobacter nephelii]], PCU:318 [[Gluconobacter nephelii]], strain 7, K. Kondo, strain RBY-1 [[Gluconobacter nephelii]]
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.