STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OAG73026.1Methylthioribose kinase. (396 aa)    
Predicted Functional Partners:
OAG73160.1
Methylthioribose-1-phosphate isomerase.
 
  0.994
OAG74862.1
5'-methylthioadenosine phosphorylase.
   
 
  0.874
OAG73025.1
Hypothetical protein.
       0.781
OAG73843.1
Polyketide synthase.
  
 0.661
OAG72512.1
Acetolactate synthase.
    
  0.599
OAG71903.1
Hypothetical protein.
    
  0.599
OAG74162.1
Acetyltransferase.
    
  0.594
OAG73014.1
Acetyltransferase; Belongs to the Nudix hydrolase family.
    
  0.594
OAG71768.1
ribosomal-protein-S5-alanine N-acetyltransferase.
    
  0.594
OAG73024.1
Endonuclease.
       0.561
Your Current Organism:
Gluconobacter japonicus
NCBI taxonomy Id: 376620
Other names: BCC 14458, BCC 36733 [[Gluconobacter nephelii]], G. japonicus, Gluconobacter japonicus Malimas et al. 2009 emend. Li et al. 2017, Gluconobacter nephelii, Gluconobacter nephelii Kommanee et al. 2011, LMG 26773 [[Gluconobacter nephelii]], LMG:26773 [[Gluconobacter nephelii]], NBRC 106061 [[Gluconobacter nephelii]], NBRC 3271, PCU 318 [[Gluconobacter nephelii]], PCU:318 [[Gluconobacter nephelii]], strain 7, K. Kondo, strain RBY-1 [[Gluconobacter nephelii]]
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.