Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
OAG73008.1 | OAG73053.1 | A0J51_01621 | A0J51_01666 | Superoxide dismutase; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family. | Protease I. | 0.619 |
OAG73008.1 | OAG74315.1 | A0J51_01621 | A0J51_00671 | Superoxide dismutase; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family. | Superoxide dismutase. | 0.965 |
OAG73008.1 | OAG74467.1 | A0J51_01621 | A0J51_00005 | Superoxide dismutase; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family. | Catalase. | 0.809 |
OAG73008.1 | guaA | A0J51_01621 | A0J51_00350 | Superoxide dismutase; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family. | GMP synthase (glutamine-hydrolyzing). | 0.444 |
OAG73008.1 | rplE | A0J51_01621 | A0J51_02721 | Superoxide dismutase; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family. | 50S ribosomal protein L5; This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits; this bridge is implicated in subunit movement. Contacts the P site tRNA; the 5S rRNA and some of its associated proteins might help stabilize positioning of ribosome-bound tRNAs. | 0.907 |
OAG73008.1 | rplN | A0J51_01621 | A0J51_02719 | Superoxide dismutase; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family. | 50S ribosomal protein L14; Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome; Belongs to the universal ribosomal protein uL14 family. | 0.931 |
OAG73008.1 | rpsJ | A0J51_01621 | A0J51_02708 | Superoxide dismutase; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family. | 30S ribosomal protein S10; Involved in the binding of tRNA to the ribosomes. Belongs to the universal ribosomal protein uS10 family. | 0.921 |
OAG73053.1 | OAG73008.1 | A0J51_01666 | A0J51_01621 | Protease I. | Superoxide dismutase; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family. | 0.619 |
OAG73053.1 | OAG73054.1 | A0J51_01666 | A0J51_01667 | Protease I. | Aldehyde dehydrogenase. | 0.680 |
OAG73053.1 | OAG74315.1 | A0J51_01666 | A0J51_00671 | Protease I. | Superoxide dismutase. | 0.819 |
OAG73053.1 | OAG74467.1 | A0J51_01666 | A0J51_00005 | Protease I. | Catalase. | 0.499 |
OAG73053.1 | guaA | A0J51_01666 | A0J51_00350 | Protease I. | GMP synthase (glutamine-hydrolyzing). | 0.512 |
OAG73053.1 | polA | A0J51_01666 | A0J51_01504 | Protease I. | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.512 |
OAG73053.1 | rplE | A0J51_01666 | A0J51_02721 | Protease I. | 50S ribosomal protein L5; This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits; this bridge is implicated in subunit movement. Contacts the P site tRNA; the 5S rRNA and some of its associated proteins might help stabilize positioning of ribosome-bound tRNAs. | 0.510 |
OAG73053.1 | rplN | A0J51_01666 | A0J51_02719 | Protease I. | 50S ribosomal protein L14; Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome; Belongs to the universal ribosomal protein uL14 family. | 0.798 |
OAG73053.1 | rpsJ | A0J51_01666 | A0J51_02708 | Protease I. | 30S ribosomal protein S10; Involved in the binding of tRNA to the ribosomes. Belongs to the universal ribosomal protein uS10 family. | 0.817 |
OAG73053.1 | rpsS | A0J51_01666 | A0J51_02713 | Protease I. | 30S ribosomal protein S19; Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA. | 0.509 |
OAG73054.1 | OAG73053.1 | A0J51_01667 | A0J51_01666 | Aldehyde dehydrogenase. | Protease I. | 0.680 |
OAG74315.1 | OAG73008.1 | A0J51_00671 | A0J51_01621 | Superoxide dismutase. | Superoxide dismutase; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family. | 0.965 |
OAG74315.1 | OAG73053.1 | A0J51_00671 | A0J51_01666 | Superoxide dismutase. | Protease I. | 0.819 |
page 1 of 3