Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
OAG73026.1 | OAG73160.1 | A0J51_01639 | A0J51_01774 | Methylthioribose kinase. | Methylthioribose-1-phosphate isomerase. | 0.994 |
OAG73026.1 | OAG74011.1 | A0J51_01639 | A0J51_00890 | Methylthioribose kinase. | Methylthioribulose-1-phosphate dehydratase. | 0.427 |
OAG73026.1 | OAG74862.1 | A0J51_01639 | A0J51_00402 | Methylthioribose kinase. | 5'-methylthioadenosine phosphorylase. | 0.874 |
OAG73026.1 | mtnD | A0J51_01639 | A0J51_00889 | Methylthioribose kinase. | Dioxygenase; Catalyzes 2 different reactions between oxygene and the acireductone 1,2-dihydroxy-3-keto-5-methylthiopentene (DHK-MTPene) depending upon the metal bound in the active site. Fe-containing acireductone dioxygenase (Fe-ARD) produces formate and 2-keto-4- methylthiobutyrate (KMTB), the alpha-ketoacid precursor of methionine in the methionine recycle pathway. Ni-containing acireductone dioxygenase (Ni-ARD) produces methylthiopropionate, carbon monoxide and formate, and does not lie on the methionine recycle pathway. | 0.417 |
OAG73160.1 | OAG73026.1 | A0J51_01774 | A0J51_01639 | Methylthioribose-1-phosphate isomerase. | Methylthioribose kinase. | 0.994 |
OAG73160.1 | OAG73796.1 | A0J51_01774 | A0J51_01269 | Methylthioribose-1-phosphate isomerase. | L-fuculose phosphate aldolase. | 0.693 |
OAG73160.1 | OAG74009.1 | A0J51_01774 | A0J51_00888 | Methylthioribose-1-phosphate isomerase. | 2,3-diketo-5-methylthio-1-phosphopentane phosphatase. | 0.860 |
OAG73160.1 | OAG74011.1 | A0J51_01774 | A0J51_00890 | Methylthioribose-1-phosphate isomerase. | Methylthioribulose-1-phosphate dehydratase. | 0.987 |
OAG73160.1 | OAG74084.1 | A0J51_01774 | A0J51_00437 | Methylthioribose-1-phosphate isomerase. | Ribulose-phosphate 3-epimerase; Belongs to the ribulose-phosphate 3-epimerase family. | 0.599 |
OAG73160.1 | OAG74664.1 | A0J51_01774 | A0J51_00202 | Methylthioribose-1-phosphate isomerase. | Methionine synthase. | 0.755 |
OAG73160.1 | OAG74862.1 | A0J51_01774 | A0J51_00402 | Methylthioribose-1-phosphate isomerase. | 5'-methylthioadenosine phosphorylase. | 0.961 |
OAG73160.1 | mtnD | A0J51_01774 | A0J51_00889 | Methylthioribose-1-phosphate isomerase. | Dioxygenase; Catalyzes 2 different reactions between oxygene and the acireductone 1,2-dihydroxy-3-keto-5-methylthiopentene (DHK-MTPene) depending upon the metal bound in the active site. Fe-containing acireductone dioxygenase (Fe-ARD) produces formate and 2-keto-4- methylthiobutyrate (KMTB), the alpha-ketoacid precursor of methionine in the methionine recycle pathway. Ni-containing acireductone dioxygenase (Ni-ARD) produces methylthiopropionate, carbon monoxide and formate, and does not lie on the methionine recycle pathway. | 0.754 |
OAG73160.1 | speE | A0J51_01774 | A0J51_02261 | Methylthioribose-1-phosphate isomerase. | Spermidine synthase; Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy-AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine; Belongs to the spermidine/spermine synthase family. | 0.589 |
OAG73160.1 | speH | A0J51_01774 | A0J51_02260 | Methylthioribose-1-phosphate isomerase. | S-adenosylmethionine decarboxylase; Catalyzes the decarboxylation of S-adenosylmethionine to S- adenosylmethioninamine (dcAdoMet), the propylamine donor required for the synthesis of the polyamines spermine and spermidine from the diamine putrescine; Belongs to the prokaryotic AdoMetDC family. Type 1 subfamily. | 0.504 |
OAG73796.1 | OAG73160.1 | A0J51_01269 | A0J51_01774 | L-fuculose phosphate aldolase. | Methylthioribose-1-phosphate isomerase. | 0.693 |
OAG73796.1 | OAG74009.1 | A0J51_01269 | A0J51_00888 | L-fuculose phosphate aldolase. | 2,3-diketo-5-methylthio-1-phosphopentane phosphatase. | 0.625 |
OAG73796.1 | OAG74011.1 | A0J51_01269 | A0J51_00890 | L-fuculose phosphate aldolase. | Methylthioribulose-1-phosphate dehydratase. | 0.516 |
OAG73796.1 | OAG74664.1 | A0J51_01269 | A0J51_00202 | L-fuculose phosphate aldolase. | Methionine synthase. | 0.549 |
OAG73796.1 | OAG74862.1 | A0J51_01269 | A0J51_00402 | L-fuculose phosphate aldolase. | 5'-methylthioadenosine phosphorylase. | 0.630 |
OAG73796.1 | mtnD | A0J51_01269 | A0J51_00889 | L-fuculose phosphate aldolase. | Dioxygenase; Catalyzes 2 different reactions between oxygene and the acireductone 1,2-dihydroxy-3-keto-5-methylthiopentene (DHK-MTPene) depending upon the metal bound in the active site. Fe-containing acireductone dioxygenase (Fe-ARD) produces formate and 2-keto-4- methylthiobutyrate (KMTB), the alpha-ketoacid precursor of methionine in the methionine recycle pathway. Ni-containing acireductone dioxygenase (Ni-ARD) produces methylthiopropionate, carbon monoxide and formate, and does not lie on the methionine recycle pathway. | 0.659 |
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