Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
OAG72521.1 | OAG72954.1 | A0J51_02266 | A0J51_01566 | Glycine dehydrogenase (decarboxylating); Belongs to the GcvP family. | Glutamate synthase. | 0.941 |
OAG72521.1 | OAG73245.1 | A0J51_02266 | A0J51_01860 | Glycine dehydrogenase (decarboxylating); Belongs to the GcvP family. | Aminotransferase. | 0.704 |
OAG72521.1 | OAG73557.1 | A0J51_02266 | A0J51_01027 | Glycine dehydrogenase (decarboxylating); Belongs to the GcvP family. | Pyruvate dehydrogenase subunit beta; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO2. | 0.929 |
OAG72521.1 | OAG74664.1 | A0J51_02266 | A0J51_00202 | Glycine dehydrogenase (decarboxylating); Belongs to the GcvP family. | Methionine synthase. | 0.931 |
OAG72521.1 | OAG74797.1 | A0J51_02266 | A0J51_00335 | Glycine dehydrogenase (decarboxylating); Belongs to the GcvP family. | Asparagine synthetase. | 0.428 |
OAG72954.1 | OAG72521.1 | A0J51_01566 | A0J51_02266 | Glutamate synthase. | Glycine dehydrogenase (decarboxylating); Belongs to the GcvP family. | 0.941 |
OAG72954.1 | OAG73245.1 | A0J51_01566 | A0J51_01860 | Glutamate synthase. | Aminotransferase. | 0.950 |
OAG72954.1 | OAG73246.1 | A0J51_01566 | A0J51_01861 | Glutamate synthase. | Homoserine dehydrogenase. | 0.636 |
OAG72954.1 | OAG73557.1 | A0J51_01566 | A0J51_01027 | Glutamate synthase. | Pyruvate dehydrogenase subunit beta; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO2. | 0.936 |
OAG72954.1 | OAG74664.1 | A0J51_01566 | A0J51_00202 | Glutamate synthase. | Methionine synthase. | 0.477 |
OAG72954.1 | OAG74797.1 | A0J51_01566 | A0J51_00335 | Glutamate synthase. | Asparagine synthetase. | 0.920 |
OAG72954.1 | dapF | A0J51_01566 | A0J51_00790 | Glutamate synthase. | Diaminopimelate epimerase; Catalyzes the stereoinversion of LL-2,6-diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso-DAP), a precursor of L- lysine and an essential component of the bacterial peptidoglycan. | 0.962 |
OAG72954.1 | glpX | A0J51_01566 | A0J51_01862 | Glutamate synthase. | Fructose-1,6-bisphosphatase. | 0.420 |
OAG73245.1 | OAG72521.1 | A0J51_01860 | A0J51_02266 | Aminotransferase. | Glycine dehydrogenase (decarboxylating); Belongs to the GcvP family. | 0.704 |
OAG73245.1 | OAG72954.1 | A0J51_01860 | A0J51_01566 | Aminotransferase. | Glutamate synthase. | 0.950 |
OAG73245.1 | OAG73246.1 | A0J51_01860 | A0J51_01861 | Aminotransferase. | Homoserine dehydrogenase. | 0.902 |
OAG73245.1 | OAG73248.1 | A0J51_01860 | A0J51_01863 | Aminotransferase. | single-stranded-DNA-specific exonuclease RecJ. | 0.785 |
OAG73245.1 | OAG73557.1 | A0J51_01860 | A0J51_01027 | Aminotransferase. | Pyruvate dehydrogenase subunit beta; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO2. | 0.684 |
OAG73245.1 | OAG73597.1 | A0J51_01860 | A0J51_01068 | Aminotransferase. | Arogenate dehydrogenase / prephenate dehydrogenase. | 0.653 |
OAG73245.1 | OAG74664.1 | A0J51_01860 | A0J51_00202 | Aminotransferase. | Methionine synthase. | 0.732 |
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