Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
OAG72543.1 | OAG73308.1 | A0J51_02289 | A0J51_01924 | Vitamin B12-dependent ribonucleotide reductase. | 3-phosphoshikimate 1-carboxyvinyltransferase. | 0.587 |
OAG72543.1 | OAG74768.1 | A0J51_02289 | A0J51_00306 | Vitamin B12-dependent ribonucleotide reductase. | Ribonucleotide-diphosphate reductase subunit beta. | 0.998 |
OAG72543.1 | OAG74770.1 | A0J51_02289 | A0J51_00308 | Vitamin B12-dependent ribonucleotide reductase. | Ribonucleotide-diphosphate reductase subunit alpha; Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides. | 0.874 |
OAG72543.1 | cmk | A0J51_02289 | A0J51_01923 | Vitamin B12-dependent ribonucleotide reductase. | Cytidylate kinase. | 0.887 |
OAG72543.1 | ndk | A0J51_02289 | A0J51_00369 | Vitamin B12-dependent ribonucleotide reductase. | Nucleoside diphosphate kinase. | 0.884 |
OAG73306.1 | OAG73308.1 | A0J51_01922 | A0J51_01924 | 30S ribosomal protein S1; Binds mRNA; thus facilitating recognition of the initiation point. It is needed to translate mRNA with a short Shine-Dalgarno (SD) purine-rich sequence. | 3-phosphoshikimate 1-carboxyvinyltransferase. | 0.589 |
OAG73306.1 | OAG73597.1 | A0J51_01922 | A0J51_01068 | 30S ribosomal protein S1; Binds mRNA; thus facilitating recognition of the initiation point. It is needed to translate mRNA with a short Shine-Dalgarno (SD) purine-rich sequence. | Arogenate dehydrogenase / prephenate dehydrogenase. | 0.457 |
OAG73306.1 | cmk | A0J51_01922 | A0J51_01923 | 30S ribosomal protein S1; Binds mRNA; thus facilitating recognition of the initiation point. It is needed to translate mRNA with a short Shine-Dalgarno (SD) purine-rich sequence. | Cytidylate kinase. | 0.970 |
OAG73306.1 | ndk | A0J51_01922 | A0J51_00369 | 30S ribosomal protein S1; Binds mRNA; thus facilitating recognition of the initiation point. It is needed to translate mRNA with a short Shine-Dalgarno (SD) purine-rich sequence. | Nucleoside diphosphate kinase. | 0.687 |
OAG73308.1 | OAG72543.1 | A0J51_01924 | A0J51_02289 | 3-phosphoshikimate 1-carboxyvinyltransferase. | Vitamin B12-dependent ribonucleotide reductase. | 0.587 |
OAG73308.1 | OAG73306.1 | A0J51_01924 | A0J51_01922 | 3-phosphoshikimate 1-carboxyvinyltransferase. | 30S ribosomal protein S1; Binds mRNA; thus facilitating recognition of the initiation point. It is needed to translate mRNA with a short Shine-Dalgarno (SD) purine-rich sequence. | 0.589 |
OAG73308.1 | OAG73597.1 | A0J51_01924 | A0J51_01068 | 3-phosphoshikimate 1-carboxyvinyltransferase. | Arogenate dehydrogenase / prephenate dehydrogenase. | 0.991 |
OAG73308.1 | OAG74768.1 | A0J51_01924 | A0J51_00306 | 3-phosphoshikimate 1-carboxyvinyltransferase. | Ribonucleotide-diphosphate reductase subunit beta. | 0.640 |
OAG73308.1 | OAG74770.1 | A0J51_01924 | A0J51_00308 | 3-phosphoshikimate 1-carboxyvinyltransferase. | Ribonucleotide-diphosphate reductase subunit alpha; Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides. | 0.587 |
OAG73308.1 | cmk | A0J51_01924 | A0J51_01923 | 3-phosphoshikimate 1-carboxyvinyltransferase. | Cytidylate kinase. | 0.985 |
OAG73308.1 | ndk | A0J51_01924 | A0J51_00369 | 3-phosphoshikimate 1-carboxyvinyltransferase. | Nucleoside diphosphate kinase. | 0.674 |
OAG73597.1 | OAG73306.1 | A0J51_01068 | A0J51_01922 | Arogenate dehydrogenase / prephenate dehydrogenase. | 30S ribosomal protein S1; Binds mRNA; thus facilitating recognition of the initiation point. It is needed to translate mRNA with a short Shine-Dalgarno (SD) purine-rich sequence. | 0.457 |
OAG73597.1 | OAG73308.1 | A0J51_01068 | A0J51_01924 | Arogenate dehydrogenase / prephenate dehydrogenase. | 3-phosphoshikimate 1-carboxyvinyltransferase. | 0.991 |
OAG73597.1 | cmk | A0J51_01068 | A0J51_01923 | Arogenate dehydrogenase / prephenate dehydrogenase. | Cytidylate kinase. | 0.862 |
OAG74206.1 | cmk | A0J51_00562 | A0J51_01923 | tRNA pseudouridine synthase A; Belongs to the pseudouridine synthase RsuA family. | Cytidylate kinase. | 0.930 |
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