Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
OAG73410.1TetR family transcriptional regulator. (181 aa)    
Predicted Functional Partners:
OAG73409.1
Dipeptidase PepQ.
 
     0.798
OAG74695.1
TonB-dependent receptor.
  
     0.677
OAG74335.1
Exodeoxyribonuclease VII large subunit.
  
     0.671
OAG72400.1
Hypothetical protein.
  
     0.612
OAG74318.1
TonB-dependent receptor.
  
     0.592
OAG73407.1
TonB-dependent receptor.
 
     0.583
OAG72965.1
SnoaL-like domain protein.
  
     0.547
OAG73359.1
Membrane protein.
  
     0.544
OAG74323.1
Secretory lipase.
  
     0.510
OAG74437.1
Deacylase.
  
     0.509
Your Current Organism:
Gluconobacter japonicus
NCBI taxonomy Id: 376620
Other names: BCC 14458, BCC 36733 [[Gluconobacter nephelii]], G. japonicus, Gluconobacter japonicus Malimas et al. 2009 emend. Li et al. 2017, Gluconobacter nephelii, Gluconobacter nephelii Kommanee et al. 2011, LMG 26773 [[Gluconobacter nephelii]], LMG:26773 [[Gluconobacter nephelii]], NBRC 106061 [[Gluconobacter nephelii]], NBRC 3271, PCU 318 [[Gluconobacter nephelii]], PCU:318 [[Gluconobacter nephelii]], strain 7, K. Kondo, strain RBY-1 [[Gluconobacter nephelii]]
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