STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OAG72467.1Sorbitol dehydrogenase. (179 aa)    
Predicted Functional Partners:
OAG72468.1
Choline dehydrogenase-like flavoprotein.
 
 
   0.983
OAG72469.1
Cytochrome C.
 
 
   0.933
OAG74022.1
Membrane-bound D-gluconate 2-dehydrogenase large subunit.
 
 
   0.913
OAG72485.1
Alcohol dehydrogenase.
 
 
   0.908
OAG73912.1
Cytochrome c subunit of aldehyde dehydrogenase.
 
 
   0.886
OAG74021.1
Gluconate 2-dehydrogenase.
  
   
 0.859
OAG72489.1
Flavoprotein.
   
   0.812
OAG73332.1
Alanine-phosphoribitol ligase.
   
   0.707
OAG74023.1
Membrane-bound D-gluconate 2-dehydrogenase cytochrome c subunit.
 
 
   0.668
OAG72470.1
Hypothetical protein.
       0.649
Your Current Organism:
Gluconobacter japonicus
NCBI taxonomy Id: 376620
Other names: BCC 14458, BCC 36733 [[Gluconobacter nephelii]], G. japonicus, Gluconobacter japonicus Malimas et al. 2009 emend. Li et al. 2017, Gluconobacter nephelii, Gluconobacter nephelii Kommanee et al. 2011, LMG 26773 [[Gluconobacter nephelii]], LMG:26773 [[Gluconobacter nephelii]], NBRC 106061 [[Gluconobacter nephelii]], NBRC 3271, PCU 318 [[Gluconobacter nephelii]], PCU:318 [[Gluconobacter nephelii]], strain 7, K. Kondo, strain RBY-1 [[Gluconobacter nephelii]]
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.