STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OAG72014.1Mechanosensitive ion channel protein. (791 aa)    
Predicted Functional Partners:
OAG73030.1
Peptidoglycan-binding protein LysM.
  
     0.664
OAG74425.1
Hypothetical protein.
  
     0.605
OAG72401.1
Alpha-ketoglutarate decarboxylase.
  
     0.577
OAG72556.1
LPS biosynthesis protein.
  
     0.566
OAG72684.1
Hypothetical protein.
  
  
  0.554
OAG72013.1
Hypothetical protein.
       0.548
OAG72012.1
Glycosyltransferase.
       0.524
OAG74024.1
Hypothetical protein.
  
     0.513
OAG73181.1
Membrane protein.
  
     0.512
OAG72086.1
Bacterial transcriptional activator domain protein.
  
     0.507
Your Current Organism:
Gluconobacter japonicus
NCBI taxonomy Id: 376620
Other names: BCC 14458, BCC 36733 [[Gluconobacter nephelii]], G. japonicus, Gluconobacter japonicus Malimas et al. 2009 emend. Li et al. 2017, Gluconobacter nephelii, Gluconobacter nephelii Kommanee et al. 2011, LMG 26773 [[Gluconobacter nephelii]], LMG:26773 [[Gluconobacter nephelii]], NBRC 106061 [[Gluconobacter nephelii]], NBRC 3271, PCU 318 [[Gluconobacter nephelii]], PCU:318 [[Gluconobacter nephelii]], strain 7, K. Kondo, strain RBY-1 [[Gluconobacter nephelii]]
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.