STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OAG72143.1Sugar/polyol transporter. (436 aa)    
Predicted Functional Partners:
OAG73305.1
Glycosyl transferase.
  
     0.536
OAG72144.1
Hypothetical protein.
       0.511
OAG72150.1
General stress protein.
  
     0.504
OAG74724.1
Substrate binding domain of ABC-type glycine betaine transport system.
  
     0.496
OAG72498.1
Magnesium transporter.
  
     0.492
OAG72374.1
Energy transducer TonB.
  
     0.475
OAG73961.1
Hypothetical protein.
  
     0.472
OAG74722.1
Porin.
  
     0.464
spy
Spheroplast protein Y precursor.
  
 
   0.450
OAG73959.1
Carbohydrate-selective porin OprB.
  
     0.422
Your Current Organism:
Gluconobacter japonicus
NCBI taxonomy Id: 376620
Other names: BCC 14458, BCC 36733 [[Gluconobacter nephelii]], G. japonicus, Gluconobacter japonicus Malimas et al. 2009 emend. Li et al. 2017, Gluconobacter nephelii, Gluconobacter nephelii Kommanee et al. 2011, LMG 26773 [[Gluconobacter nephelii]], LMG:26773 [[Gluconobacter nephelii]], NBRC 106061 [[Gluconobacter nephelii]], NBRC 3271, PCU 318 [[Gluconobacter nephelii]], PCU:318 [[Gluconobacter nephelii]], strain 7, K. Kondo, strain RBY-1 [[Gluconobacter nephelii]]
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.