Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Fjoh_0254 | Fjoh_1299 | Fjoh_0254 | Fjoh_1299 | PFAM: Excinuclease ABC, C subunit domain protein. | Methyltransferase small; Specifically methylates the adenine in position 37 of tRNA(1)(Val) (anticodon cmo5UAC). | 0.438 |
Fjoh_0254 | Fjoh_2914 | Fjoh_0254 | Fjoh_2914 | PFAM: Excinuclease ABC, C subunit domain protein. | PFAM: Excinuclease ABC, C subunit domain protein. | 0.656 |
Fjoh_0254 | cutC | Fjoh_0254 | Fjoh_0253 | PFAM: Excinuclease ABC, C subunit domain protein. | CutC family protein; Participates in the control of copper homeostasis. Belongs to the CutC family. | 0.522 |
Fjoh_0254 | fabH | Fjoh_0254 | Fjoh_0255 | PFAM: Excinuclease ABC, C subunit domain protein. | 3-oxoacyl-(acyl-carrier-protein) synthase III; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched-chain and/or straight-chain of fatty acids; Belongs to the thiolase-like superfamily. FabH family. | 0.402 |
Fjoh_1299 | Fjoh_0254 | Fjoh_1299 | Fjoh_0254 | Methyltransferase small; Specifically methylates the adenine in position 37 of tRNA(1)(Val) (anticodon cmo5UAC). | PFAM: Excinuclease ABC, C subunit domain protein. | 0.438 |
Fjoh_1299 | Fjoh_2914 | Fjoh_1299 | Fjoh_2914 | Methyltransferase small; Specifically methylates the adenine in position 37 of tRNA(1)(Val) (anticodon cmo5UAC). | PFAM: Excinuclease ABC, C subunit domain protein. | 0.438 |
Fjoh_2914 | Fjoh_0254 | Fjoh_2914 | Fjoh_0254 | PFAM: Excinuclease ABC, C subunit domain protein. | PFAM: Excinuclease ABC, C subunit domain protein. | 0.656 |
Fjoh_2914 | Fjoh_1299 | Fjoh_2914 | Fjoh_1299 | PFAM: Excinuclease ABC, C subunit domain protein. | Methyltransferase small; Specifically methylates the adenine in position 37 of tRNA(1)(Val) (anticodon cmo5UAC). | 0.438 |
cutC | Fjoh_0254 | Fjoh_0253 | Fjoh_0254 | CutC family protein; Participates in the control of copper homeostasis. Belongs to the CutC family. | PFAM: Excinuclease ABC, C subunit domain protein. | 0.522 |
fabH | Fjoh_0254 | Fjoh_0255 | Fjoh_0254 | 3-oxoacyl-(acyl-carrier-protein) synthase III; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched-chain and/or straight-chain of fatty acids; Belongs to the thiolase-like superfamily. FabH family. | PFAM: Excinuclease ABC, C subunit domain protein. | 0.402 |