STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Fjoh_1079Candidate beta-glycosyltransferase; PFAM: glycosyl transferase, family 2. (395 aa)    
Predicted Functional Partners:
Fjoh_1081
PFAM: Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase, FabA/FabZ.
 
     0.938
Fjoh_1085
PFAM: outer membrane lipoprotein carrier protein LolA.
 
    0.914
Fjoh_1104
PFAM: lipid A biosynthesis acyltransferase.
     0.903
Fjoh_1078
Probable bifunctional phospholipid/glycerol acyltransferase and transporter; PFAM: phospholipid/glycerol acyltransferase.
 
    0.894
Fjoh_1076
Peptidase family C45, acyl-coenzyme A:6-aminopenicillanic acid acyl-transferase; Predicted lipoprotein.
 
     0.886
Fjoh_1077
All-trans-retinol 13,14-reductase.
 
   
 0.875
Fjoh_1087
3-oxoacyl-(acyl-carrier-protein) synthase-like protein; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.
 
     0.869
Fjoh_1084
Predicted lipoprotein.
 
     0.867
Fjoh_1075
Phenylacetate--CoA ligase.
 
     0.866
Fjoh_1089
Hypothetical protein.
 
   0.848
Your Current Organism:
Flavobacterium johnsoniae
NCBI taxonomy Id: 376686
Other names: F. johnsoniae UW101, Flavobacterium johnsoniae ATCC 17061, Flavobacterium johnsoniae DSM 2064, Flavobacterium johnsoniae IAM 14304, Flavobacterium johnsoniae IFO 14942, Flavobacterium johnsoniae MYX.1.1.1, Flavobacterium johnsoniae NBRC 14942, Flavobacterium johnsoniae NCIB 11054, Flavobacterium johnsoniae UW101, Flavobacterium johnsoniae str. UW101, Flavobacterium johnsoniae strain UW101
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.