STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Fjoh_2019Histidine kinase; PFAM: helix-turn-helix- domain containing protein, AraC type; response regulator receiver; ATP-binding region, ATPase domain protein; histidine kinase A domain protein; Two component regulator propeller; Two component regulator three Y domain protein. (1316 aa)    
Predicted Functional Partners:
Fjoh_3925
GAF sensor hybrid histidine kinase; PFAM: response regulator receiver; GAF domain protein; ATP-binding region, ATPase domain protein; histidine kinase A domain protein.
 
 
0.986
Fjoh_4715
Multi-sensor hybrid histidine kinase; TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; GAF domain protein; ATP-binding region, ATPase domain protein; histidine kinase A domain protein; PAS fold-3 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein.
 
 
0.981
Fjoh_4243
GAF sensor hybrid histidine kinase; PFAM: response regulator receiver; GAF domain protein; ATP-binding region, ATPase domain protein; histidine kinase A domain protein.
 
 
0.980
Fjoh_3354
Multi-sensor hybrid histidine kinase/response regulator; Signal transduction protein with CHASE, GAF, and Histidine kinase domains and 3 response regulator domains.
  
 
0.979
Fjoh_0229
Multi-sensor hybrid histidine kinase; PFAM: TPR repeat-containing protein; response regulator receiver; ATP-binding region, ATPase domain protein; histidine kinase A domain protein; SMART: Tetratricopeptide domain protein.
 
 
0.952
Fjoh_2076
Histidine kinase; PFAM: helix-turn-helix- domain containing protein, AraC type; response regulator receiver; ATP-binding region, ATPase domain protein; histidine kinase A domain protein; Two component regulator propeller; Two component regulator three Y domain protein.
 
 
0.951
Fjoh_3862
Histidine kinase; Predicted lipoprotein.
 
 
0.951
Fjoh_3872
Histidine kinase; PFAM: helix-turn-helix- domain containing protein, AraC type; response regulator receiver; ATP-binding region, ATPase domain protein; histidine kinase A domain protein; Two component regulator propeller; Two component regulator three Y domain protein.
 
 
0.951
Fjoh_4193
Histidine kinase; PFAM: helix-turn-helix- domain containing protein, AraC type; response regulator receiver; ATP-binding region, ATPase domain protein; histidine kinase A domain protein; Two component regulator propeller; Two component regulator three Y domain protein.
 
 
0.951
Fjoh_3120
Histidine kinase; PFAM: helix-turn-helix- domain containing protein, AraC type; response regulator receiver; ATP-binding region, ATPase domain protein; histidine kinase A domain protein; Two component regulator propeller; Two component regulator three Y domain protein.
 
 
0.949
Your Current Organism:
Flavobacterium johnsoniae
NCBI taxonomy Id: 376686
Other names: F. johnsoniae UW101, Flavobacterium johnsoniae ATCC 17061, Flavobacterium johnsoniae DSM 2064, Flavobacterium johnsoniae IAM 14304, Flavobacterium johnsoniae IFO 14942, Flavobacterium johnsoniae MYX.1.1.1, Flavobacterium johnsoniae NBRC 14942, Flavobacterium johnsoniae NCIB 11054, Flavobacterium johnsoniae UW101, Flavobacterium johnsoniae str. UW101, Flavobacterium johnsoniae strain UW101
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.