STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Fjoh_2093Nonribosomal peptide synthesis. (2410 aa)    
Predicted Functional Partners:
Fjoh_2099
Thioesterase (type II); Similar to thioesterases involved in nonribosomal peptide synthesis.
 
  
 0.971
Fjoh_2092
Nonribosomal peptide synthesis.
 
 
0.942
Fjoh_2088
Nonribosomal peptide synthesis; Belongs to the ATP-dependent AMP-binding enzyme family.
 
 
0.930
Fjoh_2086
4'-phosphopantetheinyl transferase; Probably involved in enzyme preparation for nonribosomal peptide synthesis; Belongs to the P-Pant transferase superfamily.
 
 
 0.872
Fjoh_2101
TIGRFAM: cyclic peptide transporter; PFAM: ABC transporter related; SMART: AAA ATPase.
 
  
 0.868
Fjoh_1089
Hypothetical protein.
  
 
 0.808
Fjoh_1105
Hypothetical protein.
  
 
 0.808
acpP
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis; Belongs to the acyl carrier protein (ACP) family.
  
 
 0.808
Fjoh_3176
Hypothetical protein.
  
 
 0.808
Fjoh_3811
Hypothetical protein.
  
 
 0.808
Your Current Organism:
Flavobacterium johnsoniae
NCBI taxonomy Id: 376686
Other names: F. johnsoniae UW101, Flavobacterium johnsoniae ATCC 17061, Flavobacterium johnsoniae DSM 2064, Flavobacterium johnsoniae IAM 14304, Flavobacterium johnsoniae IFO 14942, Flavobacterium johnsoniae MYX.1.1.1, Flavobacterium johnsoniae NBRC 14942, Flavobacterium johnsoniae NCIB 11054, Flavobacterium johnsoniae UW101, Flavobacterium johnsoniae str. UW101, Flavobacterium johnsoniae strain UW101
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.