Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
Fjoh_1142 | Fjoh_1143 | PFAM: sulfatase. | Predicted lipoprotein. | 0.901 |
Fjoh_1142 | Fjoh_1144 | PFAM: sulfatase. | Hypothetical protein. | 0.850 |
Fjoh_1142 | Fjoh_3284 | PFAM: sulfatase. | Protein of unknown function DUF1214; Predicted lipoprotein. | 0.759 |
Fjoh_1142 | Fjoh_3585 | PFAM: sulfatase. | Hypothetical protein. | 0.766 |
Fjoh_1143 | Fjoh_1142 | Predicted lipoprotein. | PFAM: sulfatase. | 0.901 |
Fjoh_1143 | Fjoh_1144 | Predicted lipoprotein. | Hypothetical protein. | 0.891 |
Fjoh_1143 | Fjoh_3142 | Predicted lipoprotein. | PFAM: sulfatase. | 0.754 |
Fjoh_1143 | Fjoh_3143 | Predicted lipoprotein. | Sulfatase; Predicted lipoprotein. | 0.761 |
Fjoh_1143 | Fjoh_3283 | Predicted lipoprotein. | PFAM: sulfatase. | 0.752 |
Fjoh_1143 | Fjoh_3284 | Predicted lipoprotein. | Protein of unknown function DUF1214; Predicted lipoprotein. | 0.754 |
Fjoh_1143 | Fjoh_3585 | Predicted lipoprotein. | Hypothetical protein. | 0.752 |
Fjoh_1143 | Fjoh_4647 | Predicted lipoprotein. | PFAM: sulfatase. | 0.731 |
Fjoh_1144 | Fjoh_1142 | Hypothetical protein. | PFAM: sulfatase. | 0.850 |
Fjoh_1144 | Fjoh_1143 | Hypothetical protein. | Predicted lipoprotein. | 0.891 |
Fjoh_1144 | Fjoh_3142 | Hypothetical protein. | PFAM: sulfatase. | 0.629 |
Fjoh_1144 | Fjoh_3143 | Hypothetical protein. | Sulfatase; Predicted lipoprotein. | 0.699 |
Fjoh_1144 | Fjoh_3283 | Hypothetical protein. | PFAM: sulfatase. | 0.679 |
Fjoh_1144 | Fjoh_3284 | Hypothetical protein. | Protein of unknown function DUF1214; Predicted lipoprotein. | 0.748 |
Fjoh_1144 | Fjoh_3585 | Hypothetical protein. | Hypothetical protein. | 0.691 |
Fjoh_1144 | Fjoh_4647 | Hypothetical protein. | PFAM: sulfatase. | 0.612 |
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