STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Fjoh_4114Hypothetical protein. (832 aa)    
Predicted Functional Partners:
Fjoh_4113
PFAM: oxidoreductase domain protein; homoserine dehydrogenase, NAD-binding.
 
     0.871
Fjoh_4084
Hypothetical protein.
 
     0.798
Fjoh_4112
TIGRFAM: SSS sodium solute transporter superfamily; PFAM: Na+/solute symporter; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.
 
     0.793
Fjoh_4076
Hypothetical protein.
 
    0.789
Fjoh_4103
Predicted lipoprotein.
 
     0.789
Fjoh_4086
Hypothetical protein.
 
     0.782
Fjoh_4105
alpha-L-rhamnosidase-like protein; Related to alpha-L-rhamnosidases.
 
     0.780
Fjoh_4077
PFAM: Xylose isomerase domain protein TIM barrel.
 
     0.779
Fjoh_4082
Predicted lipoprotein.
 
     0.779
Fjoh_4090
Hypothetical protein.
 
     0.778
Your Current Organism:
Flavobacterium johnsoniae
NCBI taxonomy Id: 376686
Other names: F. johnsoniae UW101, Flavobacterium johnsoniae ATCC 17061, Flavobacterium johnsoniae DSM 2064, Flavobacterium johnsoniae IAM 14304, Flavobacterium johnsoniae IFO 14942, Flavobacterium johnsoniae MYX.1.1.1, Flavobacterium johnsoniae NBRC 14942, Flavobacterium johnsoniae NCIB 11054, Flavobacterium johnsoniae UW101, Flavobacterium johnsoniae str. UW101, Flavobacterium johnsoniae strain UW101
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.