Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Fjoh_0746 | Fjoh_0750 | Fjoh_0746 | Fjoh_0750 | PFAM: ADP-ribosylation/Crystallin J1. | PFAM: conserved hypothetical protein CHP02464. | 0.720 |
Fjoh_0746 | Fjoh_4748 | Fjoh_0746 | Fjoh_4748 | PFAM: ADP-ribosylation/Crystallin J1. | Uncharacterized protein. | 0.414 |
Fjoh_0746 | kptA | Fjoh_0746 | Fjoh_0748 | PFAM: ADP-ribosylation/Crystallin J1. | Phosphate acetyltransferase; Removes the 2'-phosphate from RNA via an intermediate in which the phosphate is ADP-ribosylated by NAD followed by a presumed transesterification to release the RNA and generate ADP-ribose 1''-2''- cyclic phosphate (APPR>P). May function as an ADP-ribosylase. | 0.908 |
Fjoh_0750 | Fjoh_0746 | Fjoh_0750 | Fjoh_0746 | PFAM: conserved hypothetical protein CHP02464. | PFAM: ADP-ribosylation/Crystallin J1. | 0.720 |
Fjoh_0750 | Fjoh_4748 | Fjoh_0750 | Fjoh_4748 | PFAM: conserved hypothetical protein CHP02464. | Uncharacterized protein. | 0.558 |
Fjoh_0750 | kptA | Fjoh_0750 | Fjoh_0748 | PFAM: conserved hypothetical protein CHP02464. | Phosphate acetyltransferase; Removes the 2'-phosphate from RNA via an intermediate in which the phosphate is ADP-ribosylated by NAD followed by a presumed transesterification to release the RNA and generate ADP-ribose 1''-2''- cyclic phosphate (APPR>P). May function as an ADP-ribosylase. | 0.842 |
Fjoh_4748 | Fjoh_0746 | Fjoh_4748 | Fjoh_0746 | Uncharacterized protein. | PFAM: ADP-ribosylation/Crystallin J1. | 0.414 |
Fjoh_4748 | Fjoh_0750 | Fjoh_4748 | Fjoh_0750 | Uncharacterized protein. | PFAM: conserved hypothetical protein CHP02464. | 0.558 |
Fjoh_4748 | kptA | Fjoh_4748 | Fjoh_0748 | Uncharacterized protein. | Phosphate acetyltransferase; Removes the 2'-phosphate from RNA via an intermediate in which the phosphate is ADP-ribosylated by NAD followed by a presumed transesterification to release the RNA and generate ADP-ribose 1''-2''- cyclic phosphate (APPR>P). May function as an ADP-ribosylase. | 0.413 |
kptA | Fjoh_0746 | Fjoh_0748 | Fjoh_0746 | Phosphate acetyltransferase; Removes the 2'-phosphate from RNA via an intermediate in which the phosphate is ADP-ribosylated by NAD followed by a presumed transesterification to release the RNA and generate ADP-ribose 1''-2''- cyclic phosphate (APPR>P). May function as an ADP-ribosylase. | PFAM: ADP-ribosylation/Crystallin J1. | 0.908 |
kptA | Fjoh_0750 | Fjoh_0748 | Fjoh_0750 | Phosphate acetyltransferase; Removes the 2'-phosphate from RNA via an intermediate in which the phosphate is ADP-ribosylated by NAD followed by a presumed transesterification to release the RNA and generate ADP-ribose 1''-2''- cyclic phosphate (APPR>P). May function as an ADP-ribosylase. | PFAM: conserved hypothetical protein CHP02464. | 0.842 |
kptA | Fjoh_4748 | Fjoh_0748 | Fjoh_4748 | Phosphate acetyltransferase; Removes the 2'-phosphate from RNA via an intermediate in which the phosphate is ADP-ribosylated by NAD followed by a presumed transesterification to release the RNA and generate ADP-ribose 1''-2''- cyclic phosphate (APPR>P). May function as an ADP-ribosylase. | Uncharacterized protein. | 0.413 |