STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFS35800.1uroporphyrinogen-III synthase. (249 aa)    
Predicted Functional Partners:
SFS39562.1
Hydroxymethylbilane synthase; Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps. Belongs to the HMBS family.
  
 0.978
SFS63795.1
uroporphyrin-III C-methyltransferase.
  
 
 0.870
hemE
Uroporphyrinogen decarboxylase; Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III.
  
 
 0.869
SFS39774.1
Porphobilinogen synthase; Belongs to the ALAD family.
  
 0.792
SFS87028.1
Protein of unknown function.
  
     0.768
SFS50170.1
Hypothetical protein.
  
     0.760
SFS62984.1
GH3 auxin-responsive promoter; Manually curated.
  
     0.756
SFS35778.1
Protein of unknown function.
       0.739
SFS38932.1
Protein of unknown function.
 
     0.735
SFS35756.1
Dolichyl-phosphate-mannose-protein mannosyltransferase.
       0.731
Your Current Organism:
Zhouia amylolytica
NCBI taxonomy Id: 376730
Other names: CGMCC 1.6114, Flavobacteriaceae bacterium HN-171, Flavobacteriaceae bacterium HN-172, Flavobacteriaceae bacterium HN-181, JCM 14016, Z. amylolytica, Zhouia amylolytica Liu et al. 2006, strain HN-171
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