STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFS36893.1Hypothetical protein. (205 aa)    
Predicted Functional Partners:
SFS55929.1
Pyruvate-ferredoxin/flavodoxin oxidoreductase.
    
  0.857
efp
Elongation factor P; Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase.
  
 0.757
SFS36867.1
Aspartate racemase; Belongs to the aspartate/glutamate racemases family.
       0.642
SFS36846.1
CAAX protease self-immunity.
  
    0.611
SFS36928.1
Thiol-disulfide isomerase or thioredoxin.
       0.532
SFS36952.1
Protein of unknown function.
       0.532
SFT02139.1
2-oxoisovalerate dehydrogenase E1 component.
   
 
  0.530
SFT04082.1
Pyruvate/2-oxoglutarate/acetoin dehydrogenase complex, dehydrogenase (E1) component.
   
 
  0.530
SFS40772.1
Iron-sulfur cluster assembly protein; Belongs to the HesB/IscA family.
    
 
 0.494
SFS36975.1
Hypothetical protein.
       0.471
Your Current Organism:
Zhouia amylolytica
NCBI taxonomy Id: 376730
Other names: CGMCC 1.6114, Flavobacteriaceae bacterium HN-171, Flavobacteriaceae bacterium HN-172, Flavobacteriaceae bacterium HN-181, JCM 14016, Z. amylolytica, Zhouia amylolytica Liu et al. 2006, strain HN-171
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.