STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFS38368.1Hypothetical protein. (227 aa)    
Predicted Functional Partners:
SFS38344.1
Por secretion system C-terminal sorting domain-containing protein.
 
     0.894
SFS42652.1
Type IX secretion system membrane protein, PorP/SprF family.
  
     0.695
SFS42675.1
Gliding motility-associated C-terminal domain-containing protein.
  
     0.664
SFS36643.1
Hypothetical protein.
  
     0.653
SFS67094.1
CarboxypepD_reg-like domain-containing protein.
  
     0.604
SFS76008.1
Protein of unknown function.
  
     0.554
SFS38320.1
Riboflavin kinase / FMN adenylyltransferase; Belongs to the ribF family.
       0.536
SFS38296.1
Vitamin K-dependent gamma-carboxylase.
       0.530
SFS53677.1
Von Willebrand factor type A domain-containing protein.
  
     0.510
SFS42620.1
Gliding motility-associated C-terminal domain-containing protein.
  
     0.498
Your Current Organism:
Zhouia amylolytica
NCBI taxonomy Id: 376730
Other names: CGMCC 1.6114, Flavobacteriaceae bacterium HN-171, Flavobacteriaceae bacterium HN-172, Flavobacteriaceae bacterium HN-181, JCM 14016, Z. amylolytica, Zhouia amylolytica Liu et al. 2006, strain HN-171
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.