STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFS40024.1Transcriptional regulator, TetR family. (222 aa)    
Predicted Functional Partners:
SFS37489.1
Hypothetical protein.
  
     0.518
SFS92415.1
Pectinacetylesterase.
 
   
 0.458
SFS38636.1
Type I phosphodiesterase / nucleotide pyrophosphatase.
  
     0.436
SFS92642.1
Metal-dependent hydrolase, endonuclease/exonuclease/phosphatase family.
  
     0.425
SFS40051.1
L-fuconate dehydratase; Belongs to the mandelate racemase/muconate lactonizing enzyme family.
       0.423
SFS75127.1
Putative MetA-pathway of phenol degradation.
  
     0.422
Your Current Organism:
Zhouia amylolytica
NCBI taxonomy Id: 376730
Other names: CGMCC 1.6114, Flavobacteriaceae bacterium HN-171, Flavobacteriaceae bacterium HN-172, Flavobacteriaceae bacterium HN-181, JCM 14016, Z. amylolytica, Zhouia amylolytica Liu et al. 2006, strain HN-171
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.