STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFS40571.1Protein of unknown function. (169 aa)    
Predicted Functional Partners:
SFS64472.1
Gliding motility-associated protein GldC.
  
     0.770
SFS75466.1
Hypothetical protein.
  
     0.768
SFS40592.1
FeS assembly SUF system protein.
       0.765
SFT14040.1
Hypothetical protein.
  
     0.754
SFS40613.1
Cysteine desulfuration protein SufE.
       0.734
bshC
Bacillithiol biosynthesis cysteine-adding enzyme BshC; Belongs to the BshC family.
  
     0.678
SFT01542.1
Acyl-CoA reductase (LuxC).
  
     0.638
SFS65630.1
ATP-dependent Clp protease adaptor protein ClpS; Belongs to the ClpS family.
  
     0.632
SFS36014.1
Hypothetical protein.
  
     0.629
SFS43597.1
Aminopeptidase N.
  
     0.623
Your Current Organism:
Zhouia amylolytica
NCBI taxonomy Id: 376730
Other names: CGMCC 1.6114, Flavobacteriaceae bacterium HN-171, Flavobacteriaceae bacterium HN-172, Flavobacteriaceae bacterium HN-181, JCM 14016, Z. amylolytica, Zhouia amylolytica Liu et al. 2006, strain HN-171
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