STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFS41130.13-oxoacid CoA-transferase subunit A. (233 aa)    
Predicted Functional Partners:
SFS41109.1
3-oxoacid CoA-transferase subunit B.
 0.999
SFS51777.1
3-hydroxyacyl-CoA dehydrogenase.
  
 
 0.927
SFT06673.1
hydroxymethylglutaryl-CoA lyase.
 
 
 0.896
SFS51758.1
acetyl-CoA acyltransferase; Belongs to the thiolase-like superfamily. Thiolase family.
 
 
 0.890
SFS83401.1
acetyl-CoA C-acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family.
 
 
 0.884
SFS57250.1
3-hydroxybutyryl-CoA dehydrogenase.
  
 
 0.870
SFS50799.1
Alkylhydroperoxidase AhpD family core domain-containing protein; Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity. Belongs to the AhpD family.
  
 
 0.598
SFS73184.1
Protocatechuate 3,4-dioxygenase beta subunit; Manually curated.
  
 
 0.582
SFS41198.1
Gliding motility-associated lipoprotein GldH.
       0.555
SFS41221.1
Cell fate regulator YaaT, PSP1 superfamily (controls sporulation, competence, biofilm development).
       0.549
Your Current Organism:
Zhouia amylolytica
NCBI taxonomy Id: 376730
Other names: CGMCC 1.6114, Flavobacteriaceae bacterium HN-171, Flavobacteriaceae bacterium HN-172, Flavobacteriaceae bacterium HN-181, JCM 14016, Z. amylolytica, Zhouia amylolytica Liu et al. 2006, strain HN-171
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