STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFS54295.1Thiol-disulfide isomerase or thioredoxin. (455 aa)    
Predicted Functional Partners:
SFS68078.1
Thiol-disulfide isomerase or thioredoxin.
  
     0.729
SFS54333.1
SusD family protein.
 
     0.655
SFS52388.1
Protein of unknown function.
    
 0.654
SFS54909.1
Peroxiredoxin (alkyl hydroperoxide reductase subunit C).
  
 0.645
SFS67805.1
Peroxiredoxin.
  
 0.645
SFS54989.1
Dihydrolipoamide dehydrogenase.
   
 0.635
SFT09659.1
Dihydrolipoamide dehydrogenase.
   
 0.635
SFS54351.1
TonB-linked outer membrane protein, SusC/RagA family.
 
     0.630
SFS91234.1
Thioredoxin-like.
 
  
0.622
SFS34058.1
Peroxiredoxin.
  
     0.607
Your Current Organism:
Zhouia amylolytica
NCBI taxonomy Id: 376730
Other names: CGMCC 1.6114, Flavobacteriaceae bacterium HN-171, Flavobacteriaceae bacterium HN-172, Flavobacteriaceae bacterium HN-181, JCM 14016, Z. amylolytica, Zhouia amylolytica Liu et al. 2006, strain HN-171
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