STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFS54621.1Glycosyl hydrolases family 16. (358 aa)    
Predicted Functional Partners:
SFS54607.1
Hypothetical protein.
    
0.959
SFS54638.1
Beta-glucosidase; Belongs to the glycosyl hydrolase 3 family.
 
 0.926
SFS54590.1
Hypothetical protein.
     0.716
SFS54551.1
TonB-linked outer membrane protein, SusC/RagA family.
     0.711
SFS54570.1
Starch-binding associating with outer membrane.
     0.698
SFS54514.1
Two component regulator propeller.
 
     0.675
SFT15587.1
Beta-glucosidase.
 
 0.495
SFS54533.1
Regulatory protein, luxR family.
 
     0.485
SFT06415.1
Endoglycosylceramidase; Belongs to the glycosyl hydrolase 5 (cellulase A) family.
 
  
 0.472
SFS39499.1
Hypothetical protein.
  
     0.451
Your Current Organism:
Zhouia amylolytica
NCBI taxonomy Id: 376730
Other names: CGMCC 1.6114, Flavobacteriaceae bacterium HN-171, Flavobacteriaceae bacterium HN-172, Flavobacteriaceae bacterium HN-181, JCM 14016, Z. amylolytica, Zhouia amylolytica Liu et al. 2006, strain HN-171
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.