STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFS63153.1Long-chain fatty acid transport protein. (415 aa)    
Predicted Functional Partners:
SFS63132.1
GDSL-like Lipase/Acylhydrolase.
 
     0.922
pdxJ
Pyridoxine 5-phosphate synthase; Catalyzes the complicated ring closure reaction between the two acyclic compounds 1-deoxy-D-xylulose-5-phosphate (DXP) and 3-amino- 2-oxopropyl phosphate (1-amino-acetone-3-phosphate or AAP) to form pyridoxine 5'-phosphate (PNP) and inorganic phosphate.
       0.683
SFS63176.1
Pimeloyl-ACP methyl ester carboxylesterase.
       0.676
SFS53265.1
Chalcone isomerase-like.
 
     0.609
SFT09519.1
Hypothetical protein.
  
     0.591
SFS85850.1
Phage repressor protein C, contains Cro/C1-type HTH and peptisase s24 domains.
  
     0.586
SFS39668.1
Hypothetical protein.
  
     0.569
SFS63110.1
Putative membrane protein.
       0.539
SFT07455.1
NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family.
  
     0.470
SFS55065.1
Capsule assembly protein Wzi.
  
     0.467
Your Current Organism:
Zhouia amylolytica
NCBI taxonomy Id: 376730
Other names: CGMCC 1.6114, Flavobacteriaceae bacterium HN-171, Flavobacteriaceae bacterium HN-172, Flavobacteriaceae bacterium HN-181, JCM 14016, Z. amylolytica, Zhouia amylolytica Liu et al. 2006, strain HN-171
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