STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFS63346.1Periplasmic chaperone for outer membrane proteins Skp. (168 aa)    
Predicted Functional Partners:
SFS63301.1
Beta-barrel assembly machine subunit BamA.
 
  
 0.874
SFS63320.1
Periplasmic chaperone for outer membrane proteins Skp.
 
     0.779
SFT07280.1
Putative negative regulator of RcsB-dependent stress response.
  
  
 0.771
SFS66662.1
Surface antigen.
 
  
 0.751
SFT07418.1
Hypothetical protein.
  
     0.740
murI
Glutamate racemase; Provides the (R)-glutamate required for cell wall biosynthesis.
       0.726
SFT11822.1
Protein of unknown function.
  
     0.716
SFS63264.1
Hypothetical protein.
   
 
 0.704
SFS33516.1
Preprotein translocase subunit SecG; Involved in protein export. Participates in an early event of protein translocation; Belongs to the SecG family.
  
    0.699
SFS95792.1
Hypothetical protein.
  
    0.676
Your Current Organism:
Zhouia amylolytica
NCBI taxonomy Id: 376730
Other names: CGMCC 1.6114, Flavobacteriaceae bacterium HN-171, Flavobacteriaceae bacterium HN-172, Flavobacteriaceae bacterium HN-181, JCM 14016, Z. amylolytica, Zhouia amylolytica Liu et al. 2006, strain HN-171
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.