STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFS65925.1phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein. (325 aa)    
Predicted Functional Partners:
SFS65895.1
phospholipid/cholesterol/gamma-HCH transport system permease protein; Belongs to the MlaE permease family.
 
 0.998
SFS65909.1
phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein.
 
 0.998
SFT16868.1
phospholipid/cholesterol/gamma-HCH transport system permease protein; Manually curated.
 
 0.978
SFT16879.1
phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein.
  
 0.966
SFT13991.1
phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein.
  
  
 
0.856
SFS66005.1
Multidrug efflux pump subunit AcrA (membrane-fusion protein).
  
     0.612
SFS65990.1
Lipoprotein-releasing system permease protein.
 
   
 0.575
SFS65876.1
Hypothetical protein.
       0.526
SFS57563.1
OmpA family protein.
   
   0.508
SFS75816.1
Chemotaxis protein MotB.
   
   0.508
Your Current Organism:
Zhouia amylolytica
NCBI taxonomy Id: 376730
Other names: CGMCC 1.6114, Flavobacteriaceae bacterium HN-171, Flavobacteriaceae bacterium HN-172, Flavobacteriaceae bacterium HN-181, JCM 14016, Z. amylolytica, Zhouia amylolytica Liu et al. 2006, strain HN-171
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