STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFS68314.1Altronate hydrolase. (538 aa)    
Predicted Functional Partners:
SFT14578.1
Tagaturonate reductase.
 
 0.990
SFS68627.1
2-dehydro-3-deoxygluconokinase.
 
 
 0.930
SFS68331.1
NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family.
 
  
 0.887
SFS43263.1
Ribose 5-phosphate isomerase B.
     
 0.846
SFS68413.1
L-fuconolactonase.
 
   
 0.783
SFS68382.1
2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway).
 
     0.774
SFS68323.1
alpha-L-fucosidase.
       0.718
SFS68338.1
Alpha-L-fucosidase.
       0.718
SFS68349.1
Right handed beta helix region.
       0.718
SFS68357.1
alpha-L-fucosidase.
       0.718
Your Current Organism:
Zhouia amylolytica
NCBI taxonomy Id: 376730
Other names: CGMCC 1.6114, Flavobacteriaceae bacterium HN-171, Flavobacteriaceae bacterium HN-172, Flavobacteriaceae bacterium HN-181, JCM 14016, Z. amylolytica, Zhouia amylolytica Liu et al. 2006, strain HN-171
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