STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFS73693.1Dihydroorotase. (479 aa)    
Predicted Functional Partners:
SFS62569.1
Glucosamine-6-phosphate deaminase; Partial gene; manually curated.
  
 0.937
SFS99313.1
Glucosamine-6-phosphate deaminase.
  
 0.937
SFT14884.1
Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase.
  
 0.937
SFT15741.1
Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase; Partial gene; manually curated.
  
 0.937
SFS85756.1
Sugar kinase of the NBD/HSP70 family, may contain an N-terminal HTH domain.
  
 
 0.817
SFT12264.1
Imidazolonepropionase.
 
     0.728
SFS73718.1
Uncharacterized damage-inducible protein DinB (forms a four-helix bundle).
       0.723
SFS35875.1
comF family protein.
  
    0.633
SFS66277.1
Tagatose-6-phosphate ketose/aldose isomerase.
  
 
 0.626
glmS
Glucosamine--fructose-6-phosphate aminotransferase (isomerizing); Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source.
    
 0.594
Your Current Organism:
Zhouia amylolytica
NCBI taxonomy Id: 376730
Other names: CGMCC 1.6114, Flavobacteriaceae bacterium HN-171, Flavobacteriaceae bacterium HN-172, Flavobacteriaceae bacterium HN-181, JCM 14016, Z. amylolytica, Zhouia amylolytica Liu et al. 2006, strain HN-171
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.