STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFS75607.1O-phosphoseryl-tRNA(Sec) selenium transferase, SepSecS. (287 aa)    
Predicted Functional Partners:
SFS75629.1
Ca-activated chloride channel family protein.
     0.994
SFS75649.1
Ca-activated chloride channel family protein.
     0.988
SFS75586.1
Oxygen tolerance.
     0.946
SFS75689.1
Protein of unknown function DUF58.
 
     0.928
SFS75563.1
SH3 domain-containing protein.
 
     0.920
SFS75674.1
Hypothetical protein.
 
     0.919
SFS75707.1
MoxR-like ATPase.
 
     0.685
ribB
3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; Belongs to the DHBP synthase family.
    
  0.662
SFS75541.1
Hypothetical protein.
       0.539
SFS55943.1
Signal transduction histidine kinase.
    
  0.465
Your Current Organism:
Zhouia amylolytica
NCBI taxonomy Id: 376730
Other names: CGMCC 1.6114, Flavobacteriaceae bacterium HN-171, Flavobacteriaceae bacterium HN-172, Flavobacteriaceae bacterium HN-181, JCM 14016, Z. amylolytica, Zhouia amylolytica Liu et al. 2006, strain HN-171
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