STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFS76909.1TonB-dependent receptor. (953 aa)    
Predicted Functional Partners:
SFS76929.1
3-phytase.
 
   
 0.959
SFS76889.1
Tetratricopeptide repeat-containing protein.
 
     0.792
SFS55319.1
SusD family protein.
  
 
   0.572
SFS55307.1
TonB-linked outer membrane protein, SusC/RagA family.
  
    0.508
SFS83871.1
SusD family protein.
  
 
   0.492
SFS93218.1
Repeat domain-containing protein.
  
 
   0.489
SFS76950.1
Protein of unknown function.
       0.429
SFS83858.1
TonB-linked outer membrane protein, SusC/RagA family.
  
    0.426
SFS83971.1
7-keto-8-aminopelargonate synthetase.
  
     0.423
SFS54570.1
Starch-binding associating with outer membrane.
  
 
   0.416
Your Current Organism:
Zhouia amylolytica
NCBI taxonomy Id: 376730
Other names: CGMCC 1.6114, Flavobacteriaceae bacterium HN-171, Flavobacteriaceae bacterium HN-172, Flavobacteriaceae bacterium HN-181, JCM 14016, Z. amylolytica, Zhouia amylolytica Liu et al. 2006, strain HN-171
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.