STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFS85179.1MFS transporter, FHS family, L-fucose permease. (447 aa)    
Predicted Functional Partners:
SFS85203.1
Hypothetical protein.
 
     0.766
SFS68474.1
L-rhamnose mutarotase.
 
  
 0.750
SFS85155.1
2-dehydro-3-deoxy-D-arabinonate dehydratase.
       0.718
SFS85224.1
Hypothetical protein.
       0.623
SFS85127.1
Transcriptional regulator, LacI family.
     
 0.551
SFS68413.1
L-fuconolactonase.
 
  
 0.529
SFS85257.1
Uncharacterized protein, contains GBA2_N and DUF608 domains.
       0.520
SFS85074.1
L-fucose isomerase.
  
  
 0.450
Your Current Organism:
Zhouia amylolytica
NCBI taxonomy Id: 376730
Other names: CGMCC 1.6114, Flavobacteriaceae bacterium HN-171, Flavobacteriaceae bacterium HN-172, Flavobacteriaceae bacterium HN-181, JCM 14016, Z. amylolytica, Zhouia amylolytica Liu et al. 2006, strain HN-171
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.