STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFT00939.1Hypothetical protein. (240 aa)    
Predicted Functional Partners:
SFS95027.1
Hypothetical protein.
  
     0.658
SFS76756.1
Hypothetical protein.
  
     0.656
SFS67410.1
Hypothetical protein.
  
     0.635
SFS85850.1
Phage repressor protein C, contains Cro/C1-type HTH and peptisase s24 domains.
  
     0.622
SFS76832.1
Protein of unknown function.
  
     0.621
SFS68199.1
Hypothetical protein.
  
     0.566
SFS92987.1
Hypothetical protein.
  
     0.551
SFT16065.1
Hypothetical protein.
  
     0.546
SFT17148.1
Hypothetical protein.
  
     0.530
SFT11495.1
Hypothetical protein.
  
     0.474
Your Current Organism:
Zhouia amylolytica
NCBI taxonomy Id: 376730
Other names: CGMCC 1.6114, Flavobacteriaceae bacterium HN-171, Flavobacteriaceae bacterium HN-172, Flavobacteriaceae bacterium HN-181, JCM 14016, Z. amylolytica, Zhouia amylolytica Liu et al. 2006, strain HN-171
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.